{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 53276241, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 52070853, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.74, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42205572, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41799512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35811014, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2116033, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.059089
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33607451, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 560958, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016691
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35810163, 
            "distinct_read_pairs": 33741213, 
            "one_read_pair": 31872798, 
            "two_read_pair": 1767761, 
            "NRF": 0.942225, 
            "PBC1": 0.944625, 
            "PBC2": 18.030038
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33576724, 
            "distinct_read_pairs": 33042797, 
            "one_read_pair": 32554363, 
            "two_read_pair": 479404, 
            "NRF": 0.984098, 
            "PBC1": 0.985218, 
            "PBC2": 67.905906
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33694981, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33694981, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33046493, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33046493, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 54738, 
        "Np": 0, 
        "N_opt": 54738, 
        "N_consv": 54738, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 100, 
            "corr_est_frag_len": 0.1973578064027, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2279788, 
            "argmin_corr": 1500, 
            "min_corr": 0.1895164, 
            "NSC": 1.041376, 
            "RSC": 0.2038729
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0621636327817
        }, 
        "rep1-pr1": {
            "FRiP": 0.0996020027422
        }, 
        "rep1-pr2": {
            "FRiP": 0.0994977711596
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0370400818515
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.256977181473, 
            "auc": 0.490649054457, 
            "ch_div": 0.147532658635, 
            "elbow_pt": 2.87334824669e-97, 
            "jsd": 0.591438179514, 
            "syn_auc": 0.498385654471, 
            "syn_elbow_pt": 0.106517218241, 
            "syn_jsd": 0.281205065034
        }
    ]
}