{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 30585523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29565921, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.67, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 49437523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48770580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 24754506, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3834966, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.15492
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38988288, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 694643, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017817
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24750077, 
            "distinct_read_pairs": 21065929, 
            "one_read_pair": 17927902, 
            "two_read_pair": 2684536, 
            "NRF": 0.851146, 
            "PBC1": 0.851038, 
            "PBC2": 6.678213
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38972286, 
            "distinct_read_pairs": 38300593, 
            "one_read_pair": 37684587, 
            "two_read_pair": 604317, 
            "NRF": 0.982765, 
            "PBC1": 0.983917, 
            "PBC2": 62.358972
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20919540, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20919540, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 38293645, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38293645, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 55809, 
        "Np": 0, 
        "N_opt": 55809, 
        "N_consv": 55809, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.250206613105644, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2234499, 
            "argmin_corr": 1500, 
            "min_corr": 0.1619914, 
            "NSC": 1.544568, 
            "RSC": 1.435361
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.357838904904
        }, 
        "rep1-pr1": {
            "FRiP": 0.350126763254
        }, 
        "rep1-pr2": {
            "FRiP": 0.350013487183
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.327758280621
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.172405081356, 
            "auc": 0.488126254476, 
            "ch_div": 0.226233270822, 
            "elbow_pt": 6.36303328725e-60, 
            "jsd": 0.748377564608, 
            "syn_auc": 0.51357206025, 
            "syn_elbow_pt": 0.33500421493, 
            "syn_jsd": 0.425501438047
        }
    ]
}