{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 27369066, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18303487, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 66.88, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 40435504, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39834022, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.51, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 15793670, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11826798, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.748832
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 31909567, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 811855, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025442
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 15790912, 
            "distinct_read_pairs": 4113729, 
            "one_read_pair": 1221421, 
            "two_read_pair": 548287, 
            "NRF": 0.260512, 
            "PBC1": 0.296913, 
            "PBC2": 2.227704
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 31854278, 
            "distinct_read_pairs": 31099457, 
            "one_read_pair": 30394886, 
            "two_read_pair": 688185, 
            "NRF": 0.976304, 
            "PBC1": 0.977345, 
            "PBC2": 44.166737
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 3966872, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 3966872, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 31097712, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31097712, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 101848, 
        "Np": 0, 
        "N_opt": 101848, 
        "N_consv": 101848, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.137916090422999, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.05912606, 
            "argmin_corr": 1500, 
            "min_corr": 0.05118622, 
            "NSC": 2.694399, 
            "RSC": 10.92337
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.514014176801
        }, 
        "rep1-pr1": {
            "FRiP": 0.593001156271
        }, 
        "rep1-pr2": {
            "FRiP": 0.593730318053
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.395365536466
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0675602525908, 
            "auc": 0.472669659307, 
            "ch_div": 0.730295857042, 
            "elbow_pt": 6.62914367056e-11, 
            "jsd": 0.746890082251, 
            "syn_auc": 0.492803577105, 
            "syn_elbow_pt": 0.261646073214, 
            "syn_jsd": 0.33469835143
        }
    ]
}