{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 51264530, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50664527, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.83, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34456442, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33972512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.6, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 40194901, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1225342, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.030485
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27204763, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 568551, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020899
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 40193645, 
            "distinct_read_pairs": 38997666, 
            "one_read_pair": 37857772, 
            "two_read_pair": 1106630, 
            "NRF": 0.970245, 
            "PBC1": 0.97077, 
            "PBC2": 34.209964
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27191772, 
            "distinct_read_pairs": 26638637, 
            "one_read_pair": 26116311, 
            "two_read_pair": 511339, 
            "NRF": 0.979658, 
            "PBC1": 0.980392, 
            "PBC2": 51.074358
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 38969559, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38969559, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26636212, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26636212, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 20456, 
        "Np": 0, 
        "N_opt": 20456, 
        "N_consv": 20456, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 215, 
            "corr_est_frag_len": 0.178123951180728, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1861323, 
            "argmin_corr": 1500, 
            "min_corr": 0.1744204, 
            "NSC": 1.021233, 
            "RSC": 0.3162197
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0452874462562
        }, 
        "rep1-pr1": {
            "FRiP": 0.0620442976178
        }, 
        "rep1-pr2": {
            "FRiP": 0.062008579564
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0346655875021
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.274741402587, 
            "auc": 0.491307727893, 
            "ch_div": 0.134336982056, 
            "elbow_pt": 9.34200299344e-113, 
            "jsd": 0.573167391413, 
            "syn_auc": 0.503223542841, 
            "syn_elbow_pt": 0.0746635116551, 
            "syn_jsd": 0.259897086212
        }
    ]
}