{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44166852, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42966033, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.28, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34456442, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33972512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.6, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35068870, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1420342, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.040502
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27204763, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 568551, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020899
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35068077, 
            "distinct_read_pairs": 33679501, 
            "one_read_pair": 32363682, 
            "two_read_pair": 1264376, 
            "NRF": 0.960403, 
            "PBC1": 0.960931, 
            "PBC2": 25.596565
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27191772, 
            "distinct_read_pairs": 26638637, 
            "one_read_pair": 26116311, 
            "two_read_pair": 511339, 
            "NRF": 0.979658, 
            "PBC1": 0.980392, 
            "PBC2": 51.074358
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33648528, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33648528, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26636212, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26636212, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 121580, 
        "Np": 0, 
        "N_opt": 121580, 
        "N_consv": 121580, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.186616730057724, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1897196, 
            "argmin_corr": 1500, 
            "min_corr": 0.1821425, 
            "NSC": 1.024565, 
            "RSC": 0.5904976
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.352538999955
        }, 
        "rep1-pr1": {
            "FRiP": 0.354682428531
        }, 
        "rep1-pr2": {
            "FRiP": 0.354530403984
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.323714317684
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.191647448709, 
            "auc": 0.490641451941, 
            "ch_div": 0.162101588647, 
            "elbow_pt": 4.19242591968e-97, 
            "jsd": 0.757056544323, 
            "syn_auc": 0.508422979832, 
            "syn_elbow_pt": 0.261059715138, 
            "syn_jsd": 0.400979581383
        }
    ]
}
