{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 61526399, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59754675, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.12, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44724457, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43936392, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.24, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 34271854, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1736810, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.050677
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35052290, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 883451, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025204
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 34271362, 
            "distinct_read_pairs": 32581699, 
            "one_read_pair": 31184311, 
            "two_read_pair": 1327605, 
            "NRF": 0.950698, 
            "PBC1": 0.957111, 
            "PBC2": 23.489149
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35015242, 
            "distinct_read_pairs": 34168360, 
            "one_read_pair": 33391562, 
            "two_read_pair": 757498, 
            "NRF": 0.975814, 
            "PBC1": 0.977266, 
            "PBC2": 44.081386
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32535044, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32535044, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34168839, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34168839, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 135208, 
        "Np": 0, 
        "N_opt": 135208, 
        "N_consv": 135208, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 115, 
            "corr_est_frag_len": 0.205205110492381, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2617888, 
            "argmin_corr": 1500, 
            "min_corr": 0.1942794, 
            "NSC": 1.056237, 
            "RSC": 0.1618401
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.232205153482
        }, 
        "rep1-pr1": {
            "FRiP": 0.214236123107
        }, 
        "rep1-pr2": {
            "FRiP": 0.214931014341
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.165717973745
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.217451261517, 
            "auc": 0.490488025539, 
            "ch_div": 0.169165130535, 
            "elbow_pt": 5.8871274659e-94, 
            "jsd": 0.666753969619, 
            "syn_auc": 0.516073506011, 
            "syn_elbow_pt": 0.196934285964, 
            "syn_jsd": 0.342220692283
        }
    ]
}
