{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 36973354, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35944399, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.22, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 49437523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48770580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29704125, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4962784, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.167074
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38988288, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 694643, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017817
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29699441, 
            "distinct_read_pairs": 24849897, 
            "one_read_pair": 20775687, 
            "two_read_pair": 3438921, 
            "NRF": 0.836713, 
            "PBC1": 0.836047, 
            "PBC2": 6.041339
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38972286, 
            "distinct_read_pairs": 38300593, 
            "one_read_pair": 37684587, 
            "two_read_pair": 604317, 
            "NRF": 0.982765, 
            "PBC1": 0.983917, 
            "PBC2": 62.358972
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24741341, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24741341, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 38293645, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38293645, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 47186, 
        "Np": 0, 
        "N_opt": 47186, 
        "N_consv": 47186, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.229234012042875, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2116919, 
            "argmin_corr": 1500, 
            "min_corr": 0.1613128, 
            "NSC": 1.421053, 
            "RSC": 1.348203
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.296399808504
        }, 
        "rep1-pr1": {
            "FRiP": 0.28881901658
        }, 
        "rep1-pr2": {
            "FRiP": 0.288239765004
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.273314309024
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.203201557231, 
            "auc": 0.489095777268, 
            "ch_div": 0.176002751043, 
            "elbow_pt": 3.09685632596e-71, 
            "jsd": 0.674343328522, 
            "syn_auc": 0.505758550607, 
            "syn_elbow_pt": 0.296728480375, 
            "syn_jsd": 0.391141995232
        }
    ]
}
