{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 48750688, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47334997, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33958907, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33570658, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.86, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37620754, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4562339, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.121272
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26577243, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 440134, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016561
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37619399, 
            "distinct_read_pairs": 33137939, 
            "one_read_pair": 29142817, 
            "two_read_pair": 3577971, 
            "NRF": 0.880874, 
            "PBC1": 0.87944, 
            "PBC2": 8.145068
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26569193, 
            "distinct_read_pairs": 26138900, 
            "one_read_pair": 25747910, 
            "two_read_pair": 384480, 
            "NRF": 0.983805, 
            "PBC1": 0.985042, 
            "PBC2": 66.968139
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33058415, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33058415, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26137109, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26137109, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 53452, 
        "Np": 0, 
        "N_opt": 53452, 
        "N_consv": 53452, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.180050177447998, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1839438, 
            "argmin_corr": 1500, 
            "min_corr": 0.1706125, 
            "NSC": 1.055316, 
            "RSC": 0.7079303
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.104602663485
        }, 
        "rep1-pr1": {
            "FRiP": 0.125761896905
        }, 
        "rep1-pr2": {
            "FRiP": 0.125809692711
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0830270620457
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.253070673633, 
            "auc": 0.490560150163, 
            "ch_div": 0.14408985673, 
            "elbow_pt": 2.00776134067e-95, 
            "jsd": 0.615627761539, 
            "syn_auc": 0.505456840076, 
            "syn_elbow_pt": 0.123210591332, 
            "syn_jsd": 0.290367455475
        }
    ]
}
