{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38452866, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37650935, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.91, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 41870237, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41512297, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.15, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25290691, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1352483, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.053478
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 32979171, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1617153, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.049036
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25290425, 
            "distinct_read_pairs": 23969449, 
            "one_read_pair": 22777492, 
            "two_read_pair": 1133201, 
            "NRF": 0.947768, 
            "PBC1": 0.950272, 
            "PBC2": 20.100134
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 32962514, 
            "distinct_read_pairs": 31387199, 
            "one_read_pair": 29928090, 
            "two_read_pair": 1394474, 
            "NRF": 0.952209, 
            "PBC1": 0.953513, 
            "PBC2": 21.46192
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23938208, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23938208, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 31362018, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31362018, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 103569, 
        "Np": 0, 
        "N_opt": 103569, 
        "N_consv": 103569, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 95, 
            "corr_est_frag_len": 0.193086379845036, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2270204, 
            "argmin_corr": 1500, 
            "min_corr": 0.1851715, 
            "NSC": 1.042743, 
            "RSC": 0.1891297
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.119683658965
        }, 
        "rep1-pr1": {
            "FRiP": 0.177476330067
        }, 
        "rep1-pr2": {
            "FRiP": 0.177368315649
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0645920874721
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.22858265199, 
            "auc": 0.488905805154, 
            "ch_div": 0.203411212898, 
            "elbow_pt": 8.75896371775e-69, 
            "jsd": 0.599851251764, 
            "syn_auc": 0.495795094786, 
            "syn_elbow_pt": 0.141827313708, 
            "syn_jsd": 0.296528363434
        }
    ]
}
