/EXTERNAL ENCODE/K005735_K005710_2_lane_gembs/ENCFF953ELH_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1819538996 | 100.00 % | 909769498 | 100.00 % | 909769498 | 100.00 % |
| General Reads | 1790260895 | 98.39 % | 900920661 | 99.03 % | 889340234 | 97.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4224982 | 0.23 % | 2127250 | 0.23 % | 2097732 | 0.23 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 25053119 | 1.38 % | 6721587 | 0.74 % | 18331532 | 2.01 % |
| Bisulfite_reads C2T | 911526247 | 50.10 % | 458521136 | 50.40 % | 453005111 | 49.79 % |
| Bisulfite_reads G2A | 882959630 | 48.53 % | 444526775 | 48.86 % | 438432855 | 48.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 676133815 |
| Average Unique | 74.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 106892807890 | 38.91 % | 43238973072 | 31.48 % | 63653834818 | 46.34 % |
| Base Counts Overall C | 29069237933 | 10.58 % | 1514119520 | 1.10 % | 27555118413 | 20.06 % |
| Base Counts Overall G | 29273220146 | 10.65 % | 27383694899 | 19.93 % | 1889525247 | 1.38 % |
| Base Counts Overall T | 107665514250 | 39.19 % | 64317960461 | 46.82 % | 43347553789 | 31.55 % |
| Base Counts Overall N | 1849608177 | 0.67 % | 920446246 | 0.67 % | 929161931 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9934624160080895 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 752784388 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 909769498 |
| 150 | 909769498 |
| Insert Size Histogram |
|---|
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