{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 63309557, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62500567, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 204488103, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 200220960, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.91, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 58482731, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 10605063, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.181337
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 177129929, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13126791, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.074108
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58474175, 
            "distinct_read_pairs": 47926914, 
            "one_read_pair": 39901564, 
            "two_read_pair": 6257295, 
            "NRF": 0.819625, 
            "PBC1": 0.83255, 
            "PBC2": 6.376807
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 176296840, 
            "distinct_read_pairs": 164054337, 
            "one_read_pair": 152982564, 
            "two_read_pair": 10373151, 
            "NRF": 0.930557, 
            "PBC1": 0.932512, 
            "PBC2": 14.747936
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47877668, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47877668, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 164003138, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 164003138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 73573, 
        "Np": 0, 
        "N_opt": 73573, 
        "N_consv": 73573, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 225, 
            "corr_est_frag_len": 0.290853827803361, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2597074, 
            "argmin_corr": 1500, 
            "min_corr": 0.1868729, 
            "NSC": 1.556426, 
            "RSC": 1.427632
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.516491527175
        }, 
        "rep1-pr1": {
            "FRiP": 0.50054218106
        }, 
        "rep1-pr2": {
            "FRiP": 0.500799474259
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.499622624845
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.146340724508, 
            "auc": 0.49413296617, 
            "ch_div": 0.140351227938, 
            "elbow_pt": 3.59844086669e-249, 
            "jsd": 0.847563316193, 
            "syn_auc": 0.504005391848, 
            "syn_elbow_pt": 0.438687390745, 
            "syn_jsd": 0.525225123204
        }
    ]
}