/EXTERNAL ENCODE/K005731_K005712_2_lane_gembs/ENCFF007FYK_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1860618946 | 100.00 % | 930309473 | 100.00 % | 930309473 | 100.00 % |
| General Reads | 1834928408 | 98.62 % | 921977084 | 99.10 % | 912951324 | 98.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4700388 | 0.25 % | 2360491 | 0.25 % | 2339897 | 0.25 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20990150 | 1.13 % | 5971898 | 0.64 % | 15018252 | 1.61 % |
| Bisulfite_reads C2T | 935570433 | 50.28 % | 469894275 | 50.51 % | 465676158 | 50.06 % |
| Bisulfite_reads G2A | 904058363 | 48.59 % | 454443300 | 48.85 % | 449615063 | 48.33 % |
| Concept | Value |
|---|---|
| Unique Fragments | 692757343 |
| Average Unique | 74.47 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 109610134362 | 39.01 % | 47058621193 | 33.50 % | 62551513169 | 44.53 % |
| Base Counts Overall C | 29522187584 | 10.51 % | 1426905545 | 1.02 % | 28095282039 | 20.00 % |
| Base Counts Overall G | 29821013512 | 10.61 % | 28024510894 | 19.95 % | 1796502618 | 1.28 % |
| Base Counts Overall T | 110093527041 | 39.19 % | 63016919604 | 44.86 % | 47076607437 | 33.51 % |
| Base Counts Overall N | 1906598347 | 0.68 % | 949773187 | 0.68 % | 956825160 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.993437042627389 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 766378035 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 930309473 |
| 150 | 930309473 |
| Insert Size Histogram |
|---|
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