/EXTERNAL ENCODE/K005731_K005712_2_lane_gembs/ENCFF363NHP_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1864508532 | 100.00 % | 932254266 | 100.00 % | 932254266 | 100.00 % |
| General Reads | 1838424815 | 98.60 % | 923216036 | 99.03 % | 915208779 | 98.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5117447 | 0.27 % | 2566714 | 0.28 % | 2550733 | 0.27 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20966270 | 1.12 % | 6471516 | 0.69 % | 14494754 | 1.55 % |
| Bisulfite_reads C2T | 937346221 | 50.27 % | 470525075 | 50.47 % | 466821146 | 50.07 % |
| Bisulfite_reads G2A | 906196041 | 48.60 % | 455257675 | 48.83 % | 450938366 | 48.37 % |
| Concept | Value |
|---|---|
| Unique Fragments | 686560198 |
| Average Unique | 73.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 109330550762 | 38.83 % | 46029585842 | 32.70 % | 63300964920 | 44.97 % |
| Base Counts Overall C | 30057807124 | 10.68 % | 1562563042 | 1.11 % | 28495244082 | 20.24 % |
| Base Counts Overall G | 30370490357 | 10.79 % | 28417452798 | 20.19 % | 1953037559 | 1.39 % |
| Base Counts Overall T | 109870935477 | 39.02 % | 63811686207 | 45.33 % | 46059249270 | 32.72 % |
| Base Counts Overall N | 1911004612 | 0.68 % | 949106277 | 0.67 % | 961898335 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9924632128655111 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 761764956 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 932254266 |
| 150 | 932254266 |
| Insert Size Histogram |
|---|
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