{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 80764053, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78195175, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 110514148, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103508637, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.66, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 60038653, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13362849, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.222571
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 77418713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4803142, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.062041
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 60037564, 
            "distinct_read_pairs": 49155299, 
            "one_read_pair": 41561232, 
            "two_read_pair": 5398074, 
            "NRF": 0.818742, 
            "PBC1": 0.845509, 
            "PBC2": 7.699271
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 77385026, 
            "distinct_read_pairs": 73023840, 
            "one_read_pair": 68991792, 
            "two_read_pair": 3771938, 
            "NRF": 0.943643, 
            "PBC1": 0.944784, 
            "PBC2": 18.290808
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 46675804, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46675804, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 72615571, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 72615571, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 51342, 
        "Np": 0, 
        "N_opt": 51342, 
        "N_consv": 51342, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.313056831216815, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.3098592, 
            "argmin_corr": 1500, 
            "min_corr": 0.1988461, 
            "NSC": 1.574368, 
            "RSC": 1.028804
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.486935034316
        }, 
        "rep1-pr1": {
            "FRiP": 0.475946241342
        }, 
        "rep1-pr2": {
            "FRiP": 0.476026627287
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.475683808655
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.154712273062, 
            "auc": 0.491403703781, 
            "ch_div": 0.152675952713, 
            "elbow_pt": 2.59436028255e-115, 
            "jsd": 0.853901718792, 
            "syn_auc": 0.505412830087, 
            "syn_elbow_pt": 0.446564119407, 
            "syn_jsd": 0.515886143686
        }
    ]
}