{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 57410048, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53884764, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.86, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 170246731, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 155092695, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 42382520, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8439942, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.199137
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 125105725, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11094233, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.088679
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42338835, 
            "distinct_read_pairs": 33940487, 
            "one_read_pair": 26935669, 
            "two_read_pair": 5825027, 
            "NRF": 0.80164, 
            "PBC1": 0.793615, 
            "PBC2": 4.624128
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 124535829, 
            "distinct_read_pairs": 114086866, 
            "one_read_pair": 105142516, 
            "two_read_pair": 8105644, 
            "NRF": 0.916097, 
            "PBC1": 0.921601, 
            "PBC2": 12.971519
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33942578, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33942578, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 114011492, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 114011492, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 58615, 
        "Np": 0, 
        "N_opt": 58615, 
        "N_consv": 58615, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.172790693422841, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1765198, 
            "argmin_corr": 1500, 
            "min_corr": 0.165629, 
            "NSC": 1.043239, 
            "RSC": 0.6575912
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.204098287266
        }, 
        "rep1-pr1": {
            "FRiP": 0.165718193179
        }, 
        "rep1-pr2": {
            "FRiP": 0.165327985643
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.153722494421
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.225977690788, 
            "auc": 0.489946031181, 
            "ch_div": 0.158819236882, 
            "elbow_pt": 5.52725629048e-84, 
            "jsd": 0.658316422924, 
            "syn_auc": 0.490647374312, 
            "syn_elbow_pt": 0.141629714925, 
            "syn_jsd": 0.334317245934
        }
    ]
}