{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59639059, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56607902, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 361029152, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 319116386, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.39, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 46626960, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8441763, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.181049
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 235767758, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 29786677, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.126339
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46620770, 
            "distinct_read_pairs": 39112229, 
            "one_read_pair": 33470435, 
            "two_read_pair": 4366198, 
            "NRF": 0.838944, 
            "PBC1": 0.855754, 
            "PBC2": 7.665808
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 234768121, 
            "distinct_read_pairs": 207785518, 
            "one_read_pair": 189864247, 
            "two_read_pair": 15883638, 
            "NRF": 0.885067, 
            "PBC1": 0.913751, 
            "PBC2": 11.953448
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 38185197, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38185197, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 205981081, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 205981081, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 47752, 
        "Np": 0, 
        "N_opt": 47752, 
        "N_consv": 47752, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 275, 
            "corr_est_frag_len": 0.343325211066447, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.3074386, 
            "argmin_corr": 1500, 
            "min_corr": 0.2366792, 
            "NSC": 1.450593, 
            "RSC": 1.507164
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.559984803898
        }, 
        "rep1-pr1": {
            "FRiP": 0.547078396325
        }, 
        "rep1-pr2": {
            "FRiP": 0.547181041886
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.547258867634
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.11527749719, 
            "auc": 0.49049475999, 
            "ch_div": 0.22199075555, 
            "elbow_pt": 4.28584005102e-94, 
            "jsd": 0.868260587934, 
            "syn_auc": 0.507500766719, 
            "syn_elbow_pt": 0.472401742741, 
            "syn_jsd": 0.562492687601
        }
    ]
}