/EXTERNAL CREST/K006436_1_lane_gembs/HPC27.Bisulfite-Seq.DNA_Methylation.JGAX00000006932_9

BACK

SAMPLE K006436_1_lane_gembs LANE HPC27.Bisulfite-Seq.DNA_Methylation.JGAX00000006932_9

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1422797391 100.00 % 1422797391 100.00 % 0 0.00 %
General Reads 1228264048 86.33 % 1228264048 86.33 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 20849114 1.47 % 20849114 1.47 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 173684229 12.21 % 173684229 12.21 % 0 0.00 %
Bisulfite_reads C2T 621029467 43.65 % 621029467 43.65 % 0 0.00 %
Bisulfite_reads G2A 628083695 44.14 % 628083695 44.14 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 934569522
Average Unique 74.82 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 65914050203 45.87 %
Base Counts Overall C 31093702220 21.64 %
Base Counts Overall G 5921720147 4.12 %
Base Counts Overall T 39201655206 27.28 %
Base Counts Overall N 1571408715 1.09 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8866594846374022
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC27.Bisulfite-Seq.DNA_Methylation.JGAX00000006932_9.mapq.png



Read Length

Read Length Reads
100 1422797391