/EXTERNAL CREST/K006433_1_lane_gembs/HPC17.Bisulfite-Seq.DNA_Methylation.JGAX00000006929_12

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SAMPLE K006433_1_lane_gembs LANE HPC17.Bisulfite-Seq.DNA_Methylation.JGAX00000006929_12

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2137663576 100.00 % 2137663576 100.00 % 0 0.00 %
General Reads 2028486957 94.89 % 2028486957 94.89 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 21503241 1.01 % 21503241 1.01 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 87673378 4.10 % 87673378 4.10 % 0 0.00 %
Bisulfite_reads C2T 1016592641 47.56 % 1016592641 47.56 % 0 0.00 %
Bisulfite_reads G2A 1033397557 48.34 % 1033397557 48.34 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1547346582
Average Unique 75.48 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 90472299298 46.56 %
Base Counts Overall C 40716826289 20.95 %
Base Counts Overall G 5054148667 2.60 %
Base Counts Overall T 55909787682 28.77 %
Base Counts Overall N 2159066785 1.11 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.902995105532784
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC17.Bisulfite-Seq.DNA_Methylation.JGAX00000006929_12.mapq.png



Read Length

Read Length Reads
65 616911213
100 1520752363