{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 39827021, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33719041, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 84.66, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31426824, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30523871, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25704354, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2832999, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.110215
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 21135150, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 460404, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.021784
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25669508, 
            "distinct_read_pairs": 22862984, 
            "one_read_pair": 20326298, 
            "two_read_pair": 2297215, 
            "NRF": 0.890667, 
            "PBC1": 0.889048, 
            "PBC2": 8.848235
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21025689, 
            "distinct_read_pairs": 20662755, 
            "one_read_pair": 20307207, 
            "two_read_pair": 349534, 
            "NRF": 0.982739, 
            "PBC1": 0.982793, 
            "PBC2": 58.097945
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22871355, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22871355, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 20674746, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20674746, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 37512, 
        "Np": 0, 
        "N_opt": 37512, 
        "N_consv": 37512, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.180193130851236, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1902491, 
            "argmin_corr": 1500, 
            "min_corr": 0.16869, 
            "NSC": 1.068191, 
            "RSC": 0.5335633
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.151156612577
        }, 
        "rep1-pr1": {
            "FRiP": 0.146754010631
        }, 
        "rep1-pr2": {
            "FRiP": 0.146669846586
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.132385318396
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.236873177697, 
            "auc": 0.48758639727, 
            "ch_div": 0.175225021692, 
            "elbow_pt": 9.51811707232e-55, 
            "jsd": 0.611547181581, 
            "syn_auc": 0.514320142819, 
            "syn_elbow_pt": 0.149108020679, 
            "syn_jsd": 0.309230220412
        }
    ]
}