{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 41895095, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40676412, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.09, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31426824, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30523871, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29084377, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 690375, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023737
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 21135150, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 460404, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.021784
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29083866, 
            "distinct_read_pairs": 28394269, 
            "one_read_pair": 27724355, 
            "two_read_pair": 653896, 
            "NRF": 0.976289, 
            "PBC1": 0.976407, 
            "PBC2": 42.398722
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21025689, 
            "distinct_read_pairs": 20662755, 
            "one_read_pair": 20307207, 
            "two_read_pair": 349534, 
            "NRF": 0.982739, 
            "PBC1": 0.982793, 
            "PBC2": 58.097945
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 28394002, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28394002, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 20674746, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20674746, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 8114, 
        "Np": 0, 
        "N_opt": 8114, 
        "N_consv": 8114, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.18348686351381, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1997308, 
            "argmin_corr": 1500, 
            "min_corr": 0.1785184, 
            "NSC": 1.027832, 
            "RSC": 0.2342242
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0102518106155
        }, 
        "rep1-pr1": {
            "FRiP": 0.0509805722587
        }, 
        "rep1-pr2": {
            "FRiP": 0.0509119686464
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00347494768261
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.237007117696, 
            "auc": 0.488845926521, 
            "ch_div": 0.203425208028, 
            "elbow_pt": 4.89785816491e-68, 
            "jsd": 0.586401932128, 
            "syn_auc": 0.518839936604, 
            "syn_elbow_pt": 0.038099385814, 
            "syn_jsd": 0.282079679122
        }
    ]
}
