/EXTERNAL CREST/K006438_1_lane_gembs/HPC35.Bisulfite-Seq.DNA_Methylation.JGAX00000006934_8

BACK

SAMPLE K006438_1_lane_gembs LANE HPC35.Bisulfite-Seq.DNA_Methylation.JGAX00000006934_8

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1614007110 100.00 % 1614007110 100.00 % 0 0.00 %
General Reads 1528204282 94.68 % 1528204282 94.68 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 30353555 1.88 % 30353555 1.88 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 55449273 3.44 % 55449273 3.44 % 0 0.00 %
Bisulfite_reads C2T 776086043 48.08 % 776086043 48.08 % 0 0.00 %
Bisulfite_reads G2A 782471794 48.48 % 782471794 48.48 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1213764422
Average Unique 77.88 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 76431656744 46.89 %
Base Counts Overall C 32594484757 19.99 %
Base Counts Overall G 4912961938 3.01 %
Base Counts Overall T 47423478541 29.09 %
Base Counts Overall N 1652136130 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9164302674542069
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC35.Bisulfite-Seq.DNA_Methylation.JGAX00000006934_8.mapq.png



Read Length

Read Length Reads
100 1614007110