/EXTERNAL CREST/K006435_1_lane_gembs/HPC25.Bisulfite-Seq.DNA_Methylation.JGAX00000006931_9

BACK

SAMPLE K006435_1_lane_gembs LANE HPC25.Bisulfite-Seq.DNA_Methylation.JGAX00000006931_9

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1476413088 100.00 % 1476413088 100.00 % 0 0.00 %
General Reads 1301575130 88.16 % 1301575130 88.16 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 20504251 1.39 % 20504251 1.39 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 154333707 10.45 % 154333707 10.45 % 0 0.00 %
Bisulfite_reads C2T 657116406 44.51 % 657116406 44.51 % 0 0.00 %
Bisulfite_reads G2A 664962975 45.04 % 664962975 45.04 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 992890422
Average Unique 75.10 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 69036615081 46.30 %
Base Counts Overall C 31928784837 21.41 %
Base Counts Overall G 5684627740 3.81 %
Base Counts Overall T 40981529259 27.48 %
Base Counts Overall N 1486164971 1.00 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8898518089843631
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC25.Bisulfite-Seq.DNA_Methylation.JGAX00000006931_9.mapq.png



Read Length

Read Length Reads
100 1476413088