{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 36432790, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35060475, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.23, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 55356831, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54258444, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.02, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 26242868, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4492137, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.171176
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 39559414, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2037828, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.051513
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26217549, 
            "distinct_read_pairs": 21744913, 
            "one_read_pair": 17904918, 
            "two_read_pair": 3292677, 
            "NRF": 0.829403, 
            "PBC1": 0.823407, 
            "PBC2": 5.4378
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 39381251, 
            "distinct_read_pairs": 37510932, 
            "one_read_pair": 35737053, 
            "two_read_pair": 1701781, 
            "NRF": 0.952507, 
            "PBC1": 0.95271, 
            "PBC2": 20.999796
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21750731, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21750731, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 37521586, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37521586, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 46481, 
        "Np": 0, 
        "N_opt": 46481, 
        "N_consv": 46481, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.167363272748879, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1791193, 
            "argmin_corr": 1500, 
            "min_corr": 0.1594627, 
            "NSC": 1.049545, 
            "RSC": 0.4019291
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.127904525037
        }, 
        "rep1-pr1": {
            "FRiP": 0.121865953688
        }, 
        "rep1-pr2": {
            "FRiP": 0.121662190312
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0952092884454
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.250827695975, 
            "auc": 0.487261530291, 
            "ch_div": 0.174535261729, 
            "elbow_pt": 6.08224828415e-52, 
            "jsd": 0.596056572313, 
            "syn_auc": 0.497101663058, 
            "syn_elbow_pt": 0.142956548773, 
            "syn_jsd": 0.274540338507
        }
    ]
}
