/EXTERNAL CREST/K006432_1_lane_gembs/HPC8.Bisulfite-Seq.DNA_Methylation.JGAX00000006928_19

BACK

SAMPLE K006432_1_lane_gembs LANE HPC8.Bisulfite-Seq.DNA_Methylation.JGAX00000006928_19

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 3166900905 100.00 % 3166900905 100.00 % 0 0.00 %
General Reads 3021337702 95.40 % 3021337702 95.40 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 33176353 1.05 % 33176353 1.05 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 112386850 3.55 % 112386850 3.55 % 0 0.00 %
Bisulfite_reads C2T 1518245383 47.94 % 1518245383 47.94 % 0 0.00 %
Bisulfite_reads G2A 1536268672 48.51 % 1536268672 48.51 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2329576049
Average Unique 76.27 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 138138421303 46.42 %
Base Counts Overall C 62190425421 20.90 %
Base Counts Overall G 8039359145 2.70 %
Base Counts Overall T 86000632282 28.90 %
Base Counts Overall N 3203134729 1.08 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9031296960907268
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
HPC8.Bisulfite-Seq.DNA_Methylation.JGAX00000006928_19.mapq.png



Read Length

Read Length Reads
100 2530186090
65 636714815