{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 34113182, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28405493, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 83.27, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 20569949, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15124916, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 73.53, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 20390197, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1335202, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.065483
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 10477258, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 433165, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.041343
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 20390023, 
            "distinct_read_pairs": 19244860, 
            "one_read_pair": 18171212, 
            "two_read_pair": 1010133, 
            "NRF": 0.943837, 
            "PBC1": 0.944211, 
            "PBC2": 17.98893
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 10458549, 
            "distinct_read_pairs": 10065869, 
            "one_read_pair": 9683482, 
            "two_read_pair": 374786, 
            "NRF": 0.962454, 
            "PBC1": 0.962012, 
            "PBC2": 25.837363
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19054995, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19054995, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 10044093, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 10044093, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 66056, 
        "Np": 0, 
        "N_opt": 66056, 
        "N_consv": 66056, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 130, 
            "corr_est_frag_len": 0.175309999531322, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1791886, 
            "argmin_corr": 1500, 
            "min_corr": 0.1686053, 
            "NSC": 1.039766, 
            "RSC": 0.63352
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0959133994076
        }, 
        "rep1-pr1": {
            "FRiP": 0.149687879759
        }, 
        "rep1-pr2": {
            "FRiP": 0.149672571275
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0756797421757
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.194407399969, 
            "auc": 0.486563482472, 
            "ch_div": 0.246568194268, 
            "elbow_pt": 1.34400518475e-46, 
            "jsd": 0.707963628657, 
            "syn_auc": 0.51256738573, 
            "syn_elbow_pt": 0.161377624407, 
            "syn_jsd": 0.336931840934
        }
    ]
}
