{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32305690, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20456138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 63.32, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 21067457, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 10706387, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 50.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 13936389, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 718822, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.051579
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 6630247, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 114044, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017201
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 13935891, 
            "distinct_read_pairs": 13344282, 
            "one_read_pair": 12781364, 
            "two_read_pair": 536158, 
            "NRF": 0.957548, 
            "PBC1": 0.957816, 
            "PBC2": 23.838801
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 6604563, 
            "distinct_read_pairs": 6532346, 
            "one_read_pair": 6461485, 
            "two_read_pair": 69778, 
            "NRF": 0.989066, 
            "PBC1": 0.989152, 
            "PBC2": 92.600605
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 13217567, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 13217567, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 6516203, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 6516203, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 20045, 
        "Np": 0, 
        "N_opt": 20045, 
        "N_consv": 20045, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.177844088994592, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1792904, 
            "argmin_corr": 1500, 
            "min_corr": 0.1705393, 
            "NSC": 1.042833, 
            "RSC": 0.8347291
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.109787868102
        }, 
        "rep1-pr1": {
            "FRiP": 0.118171085536
        }, 
        "rep1-pr2": {
            "FRiP": 0.118287467771
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0902512176076
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.166170847534, 
            "auc": 0.483830702076, 
            "ch_div": 0.35242735528, 
            "elbow_pt": 6.06675801883e-32, 
            "jsd": 0.72279646683, 
            "syn_auc": 0.520097576477, 
            "syn_elbow_pt": 0.180860097945, 
            "syn_jsd": 0.336424658511
        }
    ]
}
