{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33161041, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25012260, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 75.43, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 21067457, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 10706387, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 50.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21715152, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4695927, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.216251
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 6630247, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 114044, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017201
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21713512, 
            "distinct_read_pairs": 17028368, 
            "one_read_pair": 13613983, 
            "two_read_pair": 2487380, 
            "NRF": 0.784229, 
            "PBC1": 0.799488, 
            "PBC2": 5.473222
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 6604563, 
            "distinct_read_pairs": 6532346, 
            "one_read_pair": 6461485, 
            "two_read_pair": 69778, 
            "NRF": 0.989066, 
            "PBC1": 0.989152, 
            "PBC2": 92.600605
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17019225, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17019225, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 6516203, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 6516203, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 21108, 
        "Np": 0, 
        "N_opt": 21108, 
        "N_consv": 21108, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.589026821009022, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.4813425, 
            "argmin_corr": 1500, 
            "min_corr": 0.1681223, 
            "NSC": 3.503562, 
            "RSC": 1.343798
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.694703968383
        }, 
        "rep1-pr1": {
            "FRiP": 0.696316563395
        }, 
        "rep1-pr2": {
            "FRiP": 0.696003951601
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.692979491256
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0562305679916, 
            "auc": 0.485783543585, 
            "ch_div": 0.487474358923, 
            "elbow_pt": 1.53593454565e-41, 
            "jsd": 0.919607976424, 
            "syn_auc": 0.503579663516, 
            "syn_elbow_pt": 0.600705820889, 
            "syn_jsd": 0.668687660263
        }
    ]
}