/EXTERNAL ENCODE/K005745_K005725_2_lane_gembs/ENCFF337XLQ_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1619551156 | 100.00 % | 809775578 | 100.00 % | 809775578 | 100.00 % |
| General Reads | 1487861759 | 91.87 % | 752226193 | 92.89 % | 735635566 | 90.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 35184670 | 2.17 % | 17931473 | 2.21 % | 17253197 | 2.13 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 96504727 | 5.96 % | 39617912 | 4.89 % | 56886815 | 7.03 % |
| Bisulfite_reads C2T | 769957561 | 47.54 % | 389258618 | 48.07 % | 380698943 | 47.01 % |
| Bisulfite_reads G2A | 753088868 | 46.50 % | 380899048 | 47.04 % | 372189820 | 45.96 % |
| Concept | Value |
|---|---|
| Unique Fragments | 504940632 |
| Average Unique | 62.36 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 89427397438 | 36.57 % | 36660802807 | 29.98 % | 52766594631 | 43.15 % |
| Base Counts Overall C | 29198161063 | 11.94 % | 6233331537 | 5.10 % | 22964829526 | 18.78 % |
| Base Counts Overall G | 33648568887 | 13.76 % | 24047788743 | 19.67 % | 9600780144 | 7.85 % |
| Base Counts Overall T | 90651063581 | 37.07 % | 54521165694 | 44.59 % | 36129897887 | 29.55 % |
| Base Counts Overall N | 1627033587 | 0.67 % | 813023497 | 0.66 % | 814010090 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9305875066212014 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 568750856 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 809775578 |
| 150 | 809775578 |
| Insert Size Histogram |
|---|
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