/EXTERNAL ENCODE/K005711_K005708_2_lane_gembs/ENCFF311PSV_125bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1363987460 | 100.00 % | 681993730 | 100.00 % | 681993730 | 100.00 % |
| General Reads | 1305156533 | 95.69 % | 651373689 | 95.51 % | 653782844 | 95.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5675266 | 0.42 % | 2838994 | 0.42 % | 2836272 | 0.42 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 53155661 | 3.90 % | 27781047 | 4.07 % | 25374614 | 3.72 % |
| Bisulfite_reads C2T | 662851311 | 48.60 % | 330863246 | 48.51 % | 331988065 | 48.68 % |
| Bisulfite_reads G2A | 647980488 | 47.51 % | 323349437 | 47.41 % | 324631051 | 47.60 % |
| Concept | Value |
|---|---|
| Unique Fragments | 443292261 |
| Average Unique | 65.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 65991193708 | 38.40 % | 26451520033 | 30.78 % | 39539673675 | 46.01 % |
| Base Counts Overall C | 19670124381 | 11.45 % | 3061766403 | 3.56 % | 16608357978 | 19.33 % |
| Base Counts Overall G | 20655194849 | 12.02 % | 16802205982 | 19.55 % | 3852988867 | 4.48 % |
| Base Counts Overall T | 64153979259 | 37.33 % | 38930488235 | 45.30 % | 25223491024 | 29.35 % |
| Base Counts Overall N | 1391927763 | 0.81 % | 685229327 | 0.80 % | 706698436 | 0.82 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9535517255163376 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 508359113 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 681993730 |
| 125 | 681993730 |
| Insert Size Histogram |
|---|
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