/EXTERNAL ENCODE/K005746_K005730_2_lane_gembs/ENCFF055UXZ_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1459803140 | 100.00 % | 729901570 | 100.00 % | 729901570 | 100.00 % |
| General Reads | 1380548243 | 94.57 % | 694621151 | 95.17 % | 685927092 | 93.98 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 41084099 | 2.81 % | 20707430 | 2.84 % | 20376669 | 2.79 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 38170798 | 2.61 % | 14572989 | 2.00 % | 23597809 | 3.23 % |
| Bisulfite_reads C2T | 718502416 | 49.22 % | 361489022 | 49.53 % | 357013394 | 48.91 % |
| Bisulfite_reads G2A | 703129926 | 48.17 % | 353839559 | 48.48 % | 349290367 | 47.85 % |
| Concept | Value |
|---|---|
| Unique Fragments | 505435141 |
| Average Unique | 69.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 83770224968 | 38.00 % | 33320147395 | 30.23 % | 50450077573 | 45.77 % |
| Base Counts Overall C | 24384902467 | 11.06 % | 3264362273 | 2.96 % | 21120540194 | 19.16 % |
| Base Counts Overall G | 27052321755 | 12.27 % | 21913978378 | 19.88 % | 5138343377 | 4.66 % |
| Base Counts Overall T | 83752521876 | 38.00 % | 50976283506 | 46.25 % | 32776238370 | 29.74 % |
| Base Counts Overall N | 1470303074 | 0.67 % | 740365518 | 0.67 % | 729937556 | 0.66 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9478299666722078 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 566913558 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 729901570 |
| 150 | 729901570 |
| Insert Size Histogram |
|---|
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