/EXTERNAL ENCODE/K005746_K005730_2_lane_gembs/ENCFF710XQC_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1770609124 | 100.00 % | 885304562 | 100.00 % | 885304562 | 100.00 % |
| General Reads | 1735319256 | 98.01 % | 869945466 | 98.27 % | 865373790 | 97.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11687039 | 0.66 % | 5869478 | 0.66 % | 5817561 | 0.66 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 23602829 | 1.33 % | 9489618 | 1.07 % | 14113211 | 1.59 % |
| Bisulfite_reads C2T | 887582740 | 50.13 % | 444911498 | 50.26 % | 442671242 | 50.00 % |
| Bisulfite_reads G2A | 859423555 | 48.54 % | 430903446 | 48.67 % | 428520109 | 48.40 % |
| Concept | Value |
|---|---|
| Unique Fragments | 737545584 |
| Average Unique | 83.31 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 103037334775 | 38.54 % | 39765531557 | 29.75 % | 63271803218 | 47.33 % |
| Base Counts Overall C | 28743848710 | 10.75 % | 2211267969 | 1.65 % | 26532580741 | 19.85 % |
| Base Counts Overall G | 29759500553 | 11.13 % | 26338931299 | 19.70 % | 3420569254 | 2.56 % |
| Base Counts Overall T | 104046987343 | 38.92 % | 64476357983 | 48.23 % | 39570629360 | 29.60 % |
| Base Counts Overall N | 1774306343 | 0.66 % | 888900054 | 0.66 % | 885406289 | 0.66 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9754416353327158 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 815950940 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 885304562 |
| 150 | 885304562 |
| Insert Size Histogram |
|---|
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