/EXTERNAL ENCODE/K005741_K005740_2_lane_gembs/ENCFF585BXF_125bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1076962784 | 100.00 % | 538481392 | 100.00 % | 538481392 | 100.00 % |
| General Reads | 1057295638 | 98.17 % | 531207707 | 98.65 % | 526087931 | 97.70 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4383899 | 0.41 % | 2203277 | 0.41 % | 2180622 | 0.40 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15283247 | 1.42 % | 5070408 | 0.94 % | 10212839 | 1.90 % |
| Bisulfite_reads C2T | 539671372 | 50.11 % | 271129278 | 50.35 % | 268542094 | 49.87 % |
| Bisulfite_reads G2A | 522008165 | 48.47 % | 262281706 | 48.71 % | 259726459 | 48.23 % |
| Concept | Value |
|---|---|
| Unique Fragments | 446340873 |
| Average Unique | 82.89 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 54642412518 | 39.44 % | 21250710221 | 30.68 % | 33391702297 | 48.21 % |
| Base Counts Overall C | 14001561683 | 10.11 % | 567616028 | 0.82 % | 13433945655 | 19.39 % |
| Base Counts Overall G | 13858412407 | 10.00 % | 13077385911 | 18.88 % | 781026496 | 1.13 % |
| Base Counts Overall T | 54876652665 | 39.61 % | 33827217180 | 48.84 % | 21049435485 | 30.39 % |
| Base Counts Overall N | 1151257251 | 0.83 % | 542218922 | 0.78 % | 609038329 | 0.88 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9893003472647424 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 499414770 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 484000897 |
| 151 | 54480495 |
| 125 | 484000897 |
| 151 | 54480495 |
| Insert Size Histogram |
|---|
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