/EXTERNAL DEEP/K006038_K006039_K006040_K006041_K006042_K006043_K006044_7_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1958550894 | 100.00 % | 979275447 | 100.00 % | 979275447 | 100.00 % |
| General Reads | 1878153831 | 95.90 % | 942434797 | 96.24 % | 935719034 | 95.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 790364 | 0.04 % | 395834 | 0.04 % | 394530 | 0.04 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 79606699 | 4.06 % | 36444816 | 3.72 % | 43161883 | 4.41 % |
| Bisulfite_reads C2T | 963173971 | 49.18 % | 483195747 | 49.34 % | 479978224 | 49.01 % |
| Bisulfite_reads G2A | 915770224 | 46.76 % | 459634884 | 46.94 % | 456135340 | 46.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 641071592 |
| Average Unique | 65.46 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 71384590634 | 37.16 % | 28744369833 | 30.39 % | 42640220801 | 43.73 % |
| Base Counts Overall C | 24642189263 | 12.83 % | 2794715817 | 2.96 % | 21847473446 | 22.41 % |
| Base Counts Overall G | 25808477257 | 13.44 % | 22385772105 | 23.67 % | 3422705152 | 3.51 % |
| Base Counts Overall T | 68263360250 | 35.54 % | 39662190756 | 41.94 % | 28601169494 | 29.33 % |
| Base Counts Overall N | 1985291532 | 1.03 % | 985949545 | 1.04 % | 999341987 | 1.02 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9938683492943068 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 769545408 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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