{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 69995176, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67128140, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.9, 
            "paired": 69995176, 
            "paired_qc_failed": 0, 
            "read1": 34997588, 
            "read1_qc_failed": 0, 
            "read2": 34997588, 
            "read2_qc_failed": 0, 
            "paired_properly": 65786288, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.99, 
            "with_itself": 66468073, 
            "with_itself_qc_failed": 0, 
            "singletons": 660067, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.94, 
            "diff_chroms": 476283, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 143714130, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 141651275, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.56, 
            "paired": 143714130, 
            "paired_qc_failed": 0, 
            "read1": 71857065, 
            "read1_qc_failed": 0, 
            "read2": 71857065, 
            "read2_qc_failed": 0, 
            "paired_properly": 136021403, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.65, 
            "with_itself": 140589137, 
            "with_itself_qc_failed": 0, 
            "singletons": 1062138, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.74, 
            "diff_chroms": 3177801, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 29520221, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 5503055, 
            "paired_opt_dupes": 23839, 
            "dupes_pct": 0.186416
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56070460, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 6270525, 
            "paired_opt_dupes": 24403, 
            "dupes_pct": 0.111833
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29517809, 
            "distinct_read_pairs": 24015156, 
            "one_read_pair": 19384031, 
            "two_read_pair": 3882276, 
            "NRF": 0.813582, 
            "PBC1": 0.807158, 
            "PBC2": 4.992955
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 55969749, 
            "distinct_read_pairs": 49713031, 
            "one_read_pair": 44051001, 
            "two_read_pair": 5120262, 
            "NRF": 0.888213, 
            "PBC1": 0.886106, 
            "PBC2": 8.603271
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 48034332, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48034332, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 48034332, 
            "paired_qc_failed": 0, 
            "read1": 24017166, 
            "read1_qc_failed": 0, 
            "read2": 24017166, 
            "read2_qc_failed": 0, 
            "paired_properly": 48034332, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 48034332, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 99599870, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 99599870, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 99599870, 
            "paired_qc_failed": 0, 
            "read1": 49799935, 
            "read1_qc_failed": 0, 
            "read2": 49799935, 
            "read2_qc_failed": 0, 
            "paired_properly": 99599870, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 99599870, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 107753, 
        "Np": 0, 
        "N_opt": 107753, 
        "N_consv": 107753, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.206584509317416, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1996332, 
            "argmin_corr": 1500, 
            "min_corr": 0.1736993, 
            "NSC": 1.189323, 
            "RSC": 1.268037
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.487355672919
        }, 
        "rep1-pr1": {
            "FRiP": 0.469064205199
        }, 
        "rep1-pr2": {
            "FRiP": 0.469086813344
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.436518924278
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.138810053414, 
            "auc": 0.492822833502, 
            "ch_div": 0.265415512078, 
            "elbow_pt": 5.20367708214e-166, 
            "jsd": 0.755463055152, 
            "syn_auc": 0.502579877841, 
            "syn_elbow_pt": 0.347521938503, 
            "syn_jsd": 0.474659550965
        }
    ]
}
