/EXTERNAL DEEP/K006055_K006056_K006123_K006124_K006125_5_lane_gembs/41_Hf02.Bisulfite-Seq.DNA_methylation.EGAX00001422695.41
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 257162430 | 100.00 % | 128581215 | 100.00 % | 128581215 | 100.00 % |
| General Reads | 255130415 | 99.21 % | 127663037 | 99.29 % | 127467378 | 99.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 9 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2031997 | 0.79 % | 918169 | 0.71 % | 1113828 | 0.87 % |
| Bisulfite_reads C2T | 129818583 | 50.48 % | 64954952 | 50.52 % | 64863631 | 50.45 % |
| Bisulfite_reads G2A | 125311850 | 48.73 % | 62708094 | 48.77 % | 62603756 | 48.69 % |
| Concept | Value |
|---|---|
| Unique Fragments | 107334818 |
| Average Unique | 83.48 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9783427027 | 39.02 % | 3666190931 | 30.33 % | 6117236096 | 47.10 % |
| Base Counts Overall C | 2818482489 | 11.24 % | 86898295 | 0.72 % | 2731584194 | 21.03 % |
| Base Counts Overall G | 2638019269 | 10.52 % | 2556915887 | 21.15 % | 81103382 | 0.62 % |
| Base Counts Overall T | 9571853310 | 38.18 % | 5646215843 | 46.71 % | 3925637467 | 30.23 % |
| Base Counts Overall N | 261554830 | 1.04 % | 130413254 | 1.08 % | 131141576 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 123601760 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 93 | 128581215 |
| 100 | 128581215 |
| Insert Size Histogram |
|---|
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