{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 126448718, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 115291038, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.18, 
            "paired": 126448718, 
            "paired_qc_failed": 0, 
            "read1": 63224359, 
            "read1_qc_failed": 0, 
            "read2": 63224359, 
            "read2_qc_failed": 0, 
            "paired_properly": 111139463, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.89, 
            "with_itself": 112654790, 
            "with_itself_qc_failed": 0, 
            "singletons": 2636248, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.08, 
            "diff_chroms": 880820, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 186328420, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 182595069, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.0, 
            "paired": 186328420, 
            "paired_qc_failed": 0, 
            "read1": 93164210, 
            "read1_qc_failed": 0, 
            "read2": 93164210, 
            "read2_qc_failed": 0, 
            "paired_properly": 174653171, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.73, 
            "with_itself": 180890277, 
            "with_itself_qc_failed": 0, 
            "singletons": 1704792, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.91, 
            "diff_chroms": 4529429, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46423773, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 10954129, 
            "paired_opt_dupes": 10584, 
            "dupes_pct": 0.235959
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 73010674, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 6709019, 
            "paired_opt_dupes": 13379, 
            "dupes_pct": 0.091891
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46423254, 
            "distinct_read_pairs": 35469231, 
            "one_read_pair": 26758619, 
            "two_read_pair": 6879245, 
            "NRF": 0.76404, 
            "PBC1": 0.754418, 
            "PBC2": 3.889761
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 72957325, 
            "distinct_read_pairs": 66253408, 
            "one_read_pair": 60053338, 
            "two_read_pair": 5734419, 
            "NRF": 0.908112, 
            "PBC1": 0.906419, 
            "PBC2": 10.472436
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 70939288, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70939288, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 70939288, 
            "paired_qc_failed": 0, 
            "read1": 35469644, 
            "read1_qc_failed": 0, 
            "read2": 35469644, 
            "read2_qc_failed": 0, 
            "paired_properly": 70939288, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 70939288, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 132603310, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132603310, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 132603310, 
            "paired_qc_failed": 0, 
            "read1": 66301655, 
            "read1_qc_failed": 0, 
            "read2": 66301655, 
            "read2_qc_failed": 0, 
            "paired_properly": 132603310, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 132603310, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 142717, 
        "Np": 0, 
        "N_opt": 142717, 
        "N_consv": 142717, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.178715210156856, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1795871, 
            "argmin_corr": 1500, 
            "min_corr": 0.1745694, 
            "NSC": 1.023749, 
            "RSC": 0.8262298
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.547982926385
        }, 
        "rep1-pr1": {
            "FRiP": 0.513096844048
        }, 
        "rep1-pr2": {
            "FRiP": 0.513381119353
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.497209116262
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.160257219388, 
            "auc": 0.494087205017, 
            "ch_div": 0.163393544389, 
            "elbow_pt": 2.60437353053e-245, 
            "jsd": 0.761274328498, 
            "syn_auc": 0.502407107047, 
            "syn_elbow_pt": 0.369535347963, 
            "syn_jsd": 0.464905412771
        }
    ]
}
