{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 57002112, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51615512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.55, 
            "paired": 57002112, 
            "paired_qc_failed": 0, 
            "read1": 28501056, 
            "read1_qc_failed": 0, 
            "read2": 28501056, 
            "read2_qc_failed": 0, 
            "paired_properly": 50722463, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 88.98, 
            "with_itself": 51157105, 
            "with_itself_qc_failed": 0, 
            "singletons": 458407, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.8, 
            "diff_chroms": 223648, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 140993220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 139041098, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.62, 
            "paired": 140993220, 
            "paired_qc_failed": 0, 
            "read1": 70496610, 
            "read1_qc_failed": 0, 
            "read2": 70496610, 
            "read2_qc_failed": 0, 
            "paired_properly": 134740908, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.57, 
            "with_itself": 138315977, 
            "with_itself_qc_failed": 0, 
            "singletons": 725121, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 2179951, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 22752277, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1323363, 
            "paired_opt_dupes": 6778, 
            "dupes_pct": 0.058164
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56499814, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1540164, 
            "paired_opt_dupes": 14091, 
            "dupes_pct": 0.02726
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 22751736, 
            "distinct_read_pairs": 21428398, 
            "one_read_pair": 20167560, 
            "two_read_pair": 1200912, 
            "NRF": 0.941836, 
            "PBC1": 0.94116, 
            "PBC2": 16.793537
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56486240, 
            "distinct_read_pairs": 54946507, 
            "one_read_pair": 53441534, 
            "two_read_pair": 1471338, 
            "NRF": 0.972741, 
            "PBC1": 0.97261, 
            "PBC2": 36.321725
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 42857828, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42857828, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 42857828, 
            "paired_qc_failed": 0, 
            "read1": 21428914, 
            "read1_qc_failed": 0, 
            "read2": 21428914, 
            "read2_qc_failed": 0, 
            "paired_properly": 42857828, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 42857828, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 109919300, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109919300, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 109919300, 
            "paired_qc_failed": 0, 
            "read1": 54959650, 
            "read1_qc_failed": 0, 
            "read2": 54959650, 
            "read2_qc_failed": 0, 
            "paired_properly": 109919300, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 109919300, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 62492, 
        "Np": 0, 
        "N_opt": 62492, 
        "N_consv": 62492, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.34553089536614, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.3230653, 
            "argmin_corr": 1500, 
            "min_corr": 0.2011358, 
            "NSC": 1.717898, 
            "RSC": 1.184251
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.605002413153
        }, 
        "rep1-pr1": {
            "FRiP": 0.600191857553
        }, 
        "rep1-pr2": {
            "FRiP": 0.599871254958
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.585813764519
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0989703993962, 
            "auc": 0.492627433515, 
            "ch_div": 0.275521914199, 
            "elbow_pt": 3.04197782444e-157, 
            "jsd": 0.869380500542, 
            "syn_auc": 0.507652756091, 
            "syn_elbow_pt": 0.518589863216, 
            "syn_jsd": 0.588792493408
        }
    ]
}