{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 113449272, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105458771, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.96, 
            "paired": 113449272, 
            "paired_qc_failed": 0, 
            "read1": 56724636, 
            "read1_qc_failed": 0, 
            "read2": 56724636, 
            "read2_qc_failed": 0, 
            "paired_properly": 100522018, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 88.61, 
            "with_itself": 103224201, 
            "with_itself_qc_failed": 0, 
            "singletons": 2234570, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.97, 
            "diff_chroms": 1128403, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 140993220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 139041098, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.62, 
            "paired": 140993220, 
            "paired_qc_failed": 0, 
            "read1": 70496610, 
            "read1_qc_failed": 0, 
            "read2": 70496610, 
            "read2_qc_failed": 0, 
            "paired_properly": 134740908, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.57, 
            "with_itself": 138315977, 
            "with_itself_qc_failed": 0, 
            "singletons": 725121, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 2179951, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 33437665, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1253025, 
            "paired_opt_dupes": 16289, 
            "dupes_pct": 0.037473
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56499814, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1540164, 
            "paired_opt_dupes": 14091, 
            "dupes_pct": 0.02726
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33437221, 
            "distinct_read_pairs": 32184210, 
            "one_read_pair": 30973819, 
            "two_read_pair": 1170154, 
            "NRF": 0.962526, 
            "PBC1": 0.962392, 
            "PBC2": 26.469866
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56486240, 
            "distinct_read_pairs": 54946507, 
            "one_read_pair": 53441534, 
            "two_read_pair": 1471338, 
            "NRF": 0.972741, 
            "PBC1": 0.97261, 
            "PBC2": 36.321725
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 64369280, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64369280, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 64369280, 
            "paired_qc_failed": 0, 
            "read1": 32184640, 
            "read1_qc_failed": 0, 
            "read2": 32184640, 
            "read2_qc_failed": 0, 
            "paired_properly": 64369280, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 64369280, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 109919300, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109919300, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 109919300, 
            "paired_qc_failed": 0, 
            "read1": 54959650, 
            "read1_qc_failed": 0, 
            "read2": 54959650, 
            "read2_qc_failed": 0, 
            "paired_properly": 109919300, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 109919300, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 156798, 
        "Np": 0, 
        "N_opt": 156798, 
        "N_consv": 156798, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 110, 
            "corr_est_frag_len": 0.209204103764983, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2519876, 
            "argmin_corr": 1500, 
            "min_corr": 0.1990603, 
            "NSC": 1.050958, 
            "RSC": 0.1916548
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.269044618464
        }, 
        "rep1-pr1": {
            "FRiP": 0.243028367016
        }, 
        "rep1-pr2": {
            "FRiP": 0.242678537084
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.170317556342
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.2354276348, 
            "auc": 0.49397215867, 
            "ch_div": 0.127992434693, 
            "elbow_pt": 5.47171959523e-236, 
            "jsd": 0.643125047483, 
            "syn_auc": 0.511041367829, 
            "syn_elbow_pt": 0.199618642558, 
            "syn_jsd": 0.339031014065
        }
    ]
}