{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 58529986, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51803732, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.51, 
            "paired": 58529986, 
            "paired_qc_failed": 0, 
            "read1": 29264993, 
            "read1_qc_failed": 0, 
            "read2": 29264993, 
            "read2_qc_failed": 0, 
            "paired_properly": 51227948, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.52, 
            "with_itself": 51422436, 
            "with_itself_qc_failed": 0, 
            "singletons": 381296, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.65, 
            "diff_chroms": 87546, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 152891984, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 151063238, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.8, 
            "paired": 152891984, 
            "paired_qc_failed": 0, 
            "read1": 76445992, 
            "read1_qc_failed": 0, 
            "read2": 76445992, 
            "read2_qc_failed": 0, 
            "paired_properly": 148599864, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.19, 
            "with_itself": 150374699, 
            "with_itself_qc_failed": 0, 
            "singletons": 688539, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.45, 
            "diff_chroms": 759238, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 23701071, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 4094671, 
            "paired_opt_dupes": 5385, 
            "dupes_pct": 0.172763
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 62318190, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 1640545, 
            "paired_opt_dupes": 13302, 
            "dupes_pct": 0.026325
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23700557, 
            "distinct_read_pairs": 19605972, 
            "one_read_pair": 16097354, 
            "two_read_pair": 2995605, 
            "NRF": 0.827237, 
            "PBC1": 0.821043, 
            "PBC2": 5.373657
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 62308524, 
            "distinct_read_pairs": 60668256, 
            "one_read_pair": 59063633, 
            "two_read_pair": 1570142, 
            "NRF": 0.973675, 
            "PBC1": 0.973551, 
            "PBC2": 37.616746
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 39212800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39212800, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 39212800, 
            "paired_qc_failed": 0, 
            "read1": 19606400, 
            "read1_qc_failed": 0, 
            "read2": 19606400, 
            "read2_qc_failed": 0, 
            "paired_properly": 39212800, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 39212800, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 121355290, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 121355290, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 121355290, 
            "paired_qc_failed": 0, 
            "read1": 60677645, 
            "read1_qc_failed": 0, 
            "read2": 60677645, 
            "read2_qc_failed": 0, 
            "paired_properly": 121355290, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 121355290, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 31696, 
        "Np": 0, 
        "N_opt": 31696, 
        "N_consv": 31696, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.570442068837457, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.5029067, 
            "argmin_corr": 1500, 
            "min_corr": 0.1752574, 
            "NSC": 3.254882, 
            "RSC": 1.206121
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.844758219587
        }, 
        "rep1-pr1": {
            "FRiP": 0.841440914024
        }, 
        "rep1-pr2": {
            "FRiP": 0.841523490904
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.838707002132
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0251665224159, 
            "auc": 0.492254038351, 
            "ch_div": 0.570713997257, 
            "elbow_pt": 2.51143703394e-142, 
            "jsd": 0.962025038085, 
            "syn_auc": 0.495899611375, 
            "syn_elbow_pt": 0.723746042776, 
            "syn_jsd": 0.767341072543
        }
    ]
}