/EXTERNAL DEEP/K006071_K006072_K006073_K006074_4_lane_gembs/43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422732.43
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 311813376 | 100.00 % | 155906688 | 100.00 % | 155906688 | 100.00 % |
| General Reads | 300955992 | 96.52 % | 151230151 | 97.00 % | 149725841 | 96.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3462827 | 1.11 % | 1743704 | 1.12 % | 1719123 | 1.10 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7394557 | 2.37 % | 2932833 | 1.88 % | 4461724 | 2.86 % |
| Bisulfite_reads C2T | 156664274 | 50.24 % | 78706071 | 50.48 % | 77958203 | 50.00 % |
| Bisulfite_reads G2A | 147754545 | 47.39 % | 74267784 | 47.64 % | 73486761 | 47.14 % |
| Concept | Value |
|---|---|
| Unique Fragments | 103055529 |
| Average Unique | 66.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11597149595 | 36.82 % | 4456806979 | 28.30 % | 7140342616 | 45.35 % |
| Base Counts Overall C | 4055753165 | 12.88 % | 421568257 | 2.68 % | 3634184908 | 23.08 % |
| Base Counts Overall G | 4325579996 | 13.73 % | 3788081027 | 24.06 % | 537498969 | 3.41 % |
| Base Counts Overall T | 11130782797 | 35.34 % | 6923959387 | 43.97 % | 4206823410 | 26.72 % |
| Base Counts Overall N | 383885423 | 1.22 % | 156159838 | 0.99 % | 227725585 | 1.45 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9807764867387737 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 120535196 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 155906688 |
| 100 | 155906688 |
| Insert Size Histogram |
|---|
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