/EXTERNAL DEEP/K006071_K006072_K006073_K006074_4_lane_gembs/43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422737.43
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 352209328 | 100.00 % | 176104664 | 100.00 % | 176104664 | 100.00 % |
| General Reads | 347091068 | 98.55 % | 174234454 | 98.94 % | 172856614 | 98.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1329446 | 0.38 % | 667714 | 0.38 % | 661732 | 0.38 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3788814 | 1.08 % | 1202496 | 0.68 % | 2586318 | 1.47 % |
| Bisulfite_reads C2T | 178919335 | 50.80 % | 89801053 | 50.99 % | 89118282 | 50.61 % |
| Bisulfite_reads G2A | 169501179 | 48.13 % | 85101115 | 48.32 % | 84400064 | 47.93 % |
| Concept | Value |
|---|---|
| Unique Fragments | 146121478 |
| Average Unique | 82.97 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14125990413 | 39.71 % | 5858097271 | 32.94 % | 8267893142 | 46.48 % |
| Base Counts Overall C | 3536770564 | 9.94 % | 148271904 | 0.83 % | 3388498660 | 19.05 % |
| Base Counts Overall G | 3587792726 | 10.09 % | 3447008054 | 19.38 % | 140784672 | 0.79 % |
| Base Counts Overall T | 13940333998 | 39.19 % | 8156308145 | 45.86 % | 5784025853 | 32.52 % |
| Base Counts Overall N | 382254427 | 1.07 % | 176885690 | 0.99 % | 205368737 | 1.15 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9935245553241239 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 166825412 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 176104664 |
| 100 | 176104664 |
| Insert Size Histogram |
|---|
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