/EXTERNAL DEEP/K006071_K006072_K006073_K006074_4_lane_gembs/43_Hm03.Bisulfite-Seq.DNA_methylation.EGAX00001422740.43
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 364491776 | 100.00 % | 182245888 | 100.00 % | 182245888 | 100.00 % |
| General Reads | 359695460 | 98.68 % | 180476606 | 99.03 % | 179218854 | 98.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1387024 | 0.38 % | 696447 | 0.38 % | 690577 | 0.38 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3409292 | 0.94 % | 1072835 | 0.59 % | 2336457 | 1.28 % |
| Bisulfite_reads C2T | 185447756 | 50.88 % | 93038854 | 51.05 % | 92408902 | 50.71 % |
| Bisulfite_reads G2A | 175634728 | 48.19 % | 88134199 | 48.36 % | 87500529 | 48.01 % |
| Concept | Value |
|---|---|
| Unique Fragments | 152107439 |
| Average Unique | 83.46 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14598776114 | 39.66 % | 6062975019 | 32.94 % | 8535801095 | 46.37 % |
| Base Counts Overall C | 3672634753 | 9.98 % | 151536085 | 0.82 % | 3521098668 | 19.13 % |
| Base Counts Overall G | 3719766518 | 10.10 % | 3575084928 | 19.42 % | 144681590 | 0.79 % |
| Base Counts Overall T | 14456763761 | 39.27 % | 8434628517 | 45.82 % | 6022135244 | 32.72 % |
| Base Counts Overall N | 365728230 | 0.99 % | 182610139 | 0.99 % | 183118091 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9934996316617152 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 173602232 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 182245888 |
| 100 | 182245888 |
| Insert Size Histogram |
|---|
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