{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 132286376, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 130558633, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.69, 
            "paired": 132286376, 
            "paired_qc_failed": 0, 
            "read1": 66143188, 
            "read1_qc_failed": 0, 
            "read2": 66143188, 
            "read2_qc_failed": 0, 
            "paired_properly": 127632735, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.48, 
            "with_itself": 129836452, 
            "with_itself_qc_failed": 0, 
            "singletons": 722181, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.55, 
            "diff_chroms": 1623019, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 195514228, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 192553965, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.49, 
            "paired": 195514228, 
            "paired_qc_failed": 0, 
            "read1": 97757114, 
            "read1_qc_failed": 0, 
            "read2": 97757114, 
            "read2_qc_failed": 0, 
            "paired_properly": 184591444, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.41, 
            "with_itself": 190690270, 
            "with_itself_qc_failed": 0, 
            "singletons": 1863695, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.95, 
            "diff_chroms": 4309653, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 55442522, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 6151066, 
            "paired_opt_dupes": 11730, 
            "dupes_pct": 0.110945
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 77004602, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 6090607, 
            "paired_opt_dupes": 12922, 
            "dupes_pct": 0.079094
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 55441499, 
            "distinct_read_pairs": 49290551, 
            "one_read_pair": 43703886, 
            "two_read_pair": 5069663, 
            "NRF": 0.889055, 
            "PBC1": 0.886658, 
            "PBC2": 8.620669
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 76983195, 
            "distinct_read_pairs": 70894296, 
            "one_read_pair": 65158036, 
            "two_read_pair": 5405511, 
            "NRF": 0.920906, 
            "PBC1": 0.919087, 
            "PBC2": 12.054001
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 98582912, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 98582912, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 98582912, 
            "paired_qc_failed": 0, 
            "read1": 49291456, 
            "read1_qc_failed": 0, 
            "read2": 49291456, 
            "read2_qc_failed": 0, 
            "paired_properly": 98582912, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 98582912, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 141827990, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 141827990, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 141827990, 
            "paired_qc_failed": 0, 
            "read1": 70913995, 
            "read1_qc_failed": 0, 
            "read2": 70913995, 
            "read2_qc_failed": 0, 
            "paired_properly": 141827990, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 141827990, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 122215, 
        "Np": 0, 
        "N_opt": 122215, 
        "N_consv": 122215, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.199599118512738, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2017531, 
            "argmin_corr": 1500, 
            "min_corr": 0.1833969, 
            "NSC": 1.088345, 
            "RSC": 0.8826574
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.567475823105
        }, 
        "rep1-pr1": {
            "FRiP": 0.550460441182
        }, 
        "rep1-pr2": {
            "FRiP": 0.550605176854
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.550427981623
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.164464220172, 
            "auc": 0.494982746914, 
            "ch_div": 0.118053958956, 
            "elbow_pt": 0.0, 
            "jsd": 0.842189546077, 
            "syn_auc": 0.508226420431, 
            "syn_elbow_pt": 0.401734818354, 
            "syn_jsd": 0.488452622372
        }
    ]
}