{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 110370314, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108506451, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 110370314, 
            "paired_qc_failed": 0, 
            "read1": 55185157, 
            "read1_qc_failed": 0, 
            "read2": 55185157, 
            "read2_qc_failed": 0, 
            "paired_properly": 106118482, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.15, 
            "with_itself": 107777596, 
            "with_itself_qc_failed": 0, 
            "singletons": 728855, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.66, 
            "diff_chroms": 1174929, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 168079694, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 165646880, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 168079694, 
            "paired_qc_failed": 0, 
            "read1": 84039847, 
            "read1_qc_failed": 0, 
            "read2": 84039847, 
            "read2_qc_failed": 0, 
            "paired_properly": 159505121, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.9, 
            "with_itself": 164126359, 
            "with_itself_qc_failed": 0, 
            "singletons": 1520521, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.9, 
            "diff_chroms": 2770169, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46194718, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3755878, 
            "paired_opt_dupes": 7803, 
            "dupes_pct": 0.081305
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 66513677, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3909802, 
            "paired_opt_dupes": 10372, 
            "dupes_pct": 0.058782
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46193261, 
            "distinct_read_pairs": 42437487, 
            "one_read_pair": 38921333, 
            "two_read_pair": 3290943, 
            "NRF": 0.918694, 
            "PBC1": 0.917145, 
            "PBC2": 11.826803
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 66496808, 
            "distinct_read_pairs": 62587995, 
            "one_read_pair": 58831025, 
            "two_read_pair": 3612814, 
            "NRF": 0.941218, 
            "PBC1": 0.939973, 
            "PBC2": 16.283989
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 84877680, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 84877680, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 84877680, 
            "paired_qc_failed": 0, 
            "read1": 42438840, 
            "read1_qc_failed": 0, 
            "read2": 42438840, 
            "read2_qc_failed": 0, 
            "paired_properly": 84877680, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 84877680, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 125207750, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125207750, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 125207750, 
            "paired_qc_failed": 0, 
            "read1": 62603875, 
            "read1_qc_failed": 0, 
            "read2": 62603875, 
            "read2_qc_failed": 0, 
            "paired_properly": 125207750, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 125207750, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 60280, 
        "Np": 0, 
        "N_opt": 60280, 
        "N_consv": 60280, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.260281450575421, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2528102, 
            "argmin_corr": 1500, 
            "min_corr": 0.1908899, 
            "NSC": 1.363516, 
            "RSC": 1.12066
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.45596091729
        }, 
        "rep1-pr1": {
            "FRiP": 0.449076674849
        }, 
        "rep1-pr2": {
            "FRiP": 0.449077732833
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.442795517086
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.179965621609, 
            "auc": 0.494596096045, 
            "ch_div": 0.119114592392, 
            "elbow_pt": 4.92251743458e-294, 
            "jsd": 0.841918916271, 
            "syn_auc": 0.496549456238, 
            "syn_elbow_pt": 0.414119051127, 
            "syn_jsd": 0.484765262728
        }
    ]
}