{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 207021200, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 203737747, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.41, 
            "paired": 207021200, 
            "paired_qc_failed": 0, 
            "read1": 103510600, 
            "read1_qc_failed": 0, 
            "read2": 103510600, 
            "read2_qc_failed": 0, 
            "paired_properly": 199670751, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.45, 
            "with_itself": 202404036, 
            "with_itself_qc_failed": 0, 
            "singletons": 1333711, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.64, 
            "diff_chroms": 1696661, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 168079694, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 165646880, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 168079694, 
            "paired_qc_failed": 0, 
            "read1": 84039847, 
            "read1_qc_failed": 0, 
            "read2": 84039847, 
            "read2_qc_failed": 0, 
            "paired_properly": 159505121, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.9, 
            "with_itself": 164126359, 
            "with_itself_qc_failed": 0, 
            "singletons": 1520521, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.9, 
            "diff_chroms": 2770169, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 82977191, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 9081765, 
            "paired_opt_dupes": 15877, 
            "dupes_pct": 0.109449
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 66513677, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3909802, 
            "paired_opt_dupes": 10372, 
            "dupes_pct": 0.058782
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 82976283, 
            "distinct_read_pairs": 73894597, 
            "one_read_pair": 65643506, 
            "two_read_pair": 7489251, 
            "NRF": 0.890551, 
            "PBC1": 0.88834, 
            "PBC2": 8.76503
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 66496808, 
            "distinct_read_pairs": 62587995, 
            "one_read_pair": 58831025, 
            "two_read_pair": 3612814, 
            "NRF": 0.941218, 
            "PBC1": 0.939973, 
            "PBC2": 16.283989
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 147790852, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147790852, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 147790852, 
            "paired_qc_failed": 0, 
            "read1": 73895426, 
            "read1_qc_failed": 0, 
            "read2": 73895426, 
            "read2_qc_failed": 0, 
            "paired_properly": 147790852, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 147790852, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 125207750, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125207750, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 125207750, 
            "paired_qc_failed": 0, 
            "read1": 62603875, 
            "read1_qc_failed": 0, 
            "read2": 62603875, 
            "read2_qc_failed": 0, 
            "paired_properly": 125207750, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 125207750, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 197491, 
        "Np": 0, 
        "N_opt": 197491, 
        "N_consv": 197491, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.183263780044908, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1899022, 
            "argmin_corr": 1500, 
            "min_corr": 0.1783766, 
            "NSC": 1.027398, 
            "RSC": 0.4240288
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.28496247838
        }, 
        "rep1-pr1": {
            "FRiP": 0.280161386087
        }, 
        "rep1-pr2": {
            "FRiP": 0.280889728391
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.230422103797
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247309611305, 
            "auc": 0.495903462063, 
            "ch_div": 0.10652066998, 
            "elbow_pt": 0.0, 
            "jsd": 0.624741600259, 
            "syn_auc": 0.49849859737, 
            "syn_elbow_pt": 0.2064679232, 
            "syn_jsd": 0.338063517782
        }
    ]
}