/EXTERNAL DEEP/K006084_K006085_K006086_K006126_4_lane_gembs/51_Hf01.Bisulfite-Seq.DNA_methylation.EGAX00001423084.51
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 305036360 | 100.00 % | 152518180 | 100.00 % | 152518180 | 100.00 % |
| General Reads | 300949182 | 98.66 % | 151013445 | 99.01 % | 149935737 | 98.31 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4087175 | 1.34 % | 1504734 | 0.99 % | 2582441 | 1.69 % |
| Bisulfite_reads C2T | 153501884 | 50.32 % | 77017585 | 50.50 % | 76484299 | 50.15 % |
| Bisulfite_reads G2A | 147447301 | 48.34 % | 73995861 | 48.52 % | 73451440 | 48.16 % |
| Concept | Value |
|---|---|
| Unique Fragments | 127594271 |
| Average Unique | 83.66 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 12057736121 | 39.14 % | 4757507304 | 30.88 % | 7300228817 | 47.39 % |
| Base Counts Overall C | 3178623766 | 10.32 % | 123248033 | 0.80 % | 3055375733 | 19.83 % |
| Base Counts Overall G | 3177718110 | 10.31 % | 3060508746 | 19.87 % | 117209364 | 0.76 % |
| Base Counts Overall T | 12029091879 | 39.04 % | 7310354021 | 47.46 % | 4718737858 | 30.63 % |
| Base Counts Overall N | 365502484 | 1.19 % | 152718076 | 0.99 % | 212784408 | 1.38 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 145458789 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 152518180 |
| 100 | 152518180 |
| Insert Size Histogram |
|---|
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