/EXTERNAL DEEP/K006084_K006085_K006086_K006126_4_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1205066416 | 100.00 % | 602533208 | 100.00 % | 602533208 | 100.00 % |
| General Reads | 1188234959 | 98.60 % | 595831164 | 98.89 % | 592403795 | 98.32 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 4 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16831447 | 1.40 % | 6702040 | 1.11 % | 10129407 | 1.68 % |
| Bisulfite_reads C2T | 606298045 | 50.31 % | 303997354 | 50.45 % | 302300691 | 50.17 % |
| Bisulfite_reads G2A | 581936924 | 48.29 % | 291833814 | 48.43 % | 290103110 | 48.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 503133391 |
| Average Unique | 83.50 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 47222204595 | 39.15 % | 18399222653 | 30.79 % | 28822981942 | 47.36 % |
| Base Counts Overall C | 12665176170 | 10.50 % | 495832095 | 0.83 % | 12169344075 | 20.00 % |
| Base Counts Overall G | 12430516318 | 10.31 % | 11959996051 | 20.01 % | 470520267 | 0.77 % |
| Base Counts Overall T | 46897861787 | 38.88 % | 28297079067 | 47.35 % | 18600782720 | 30.57 % |
| Base Counts Overall N | 1397730199 | 1.16 % | 605505195 | 1.01 % | 792225004 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 574633320 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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