/EXTERNAL DEEP/K006093_K006094_K006095_3_lane_gembs/51_Hf03.Bisulfite-Seq.DNA_methylation.EGAX00001423267.51

BACK

SAMPLE K006093_K006094_K006095_3_lane_gembs LANE 51_Hf03.Bisulfite-Seq.DNA_methylation.EGAX00001423267.51

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 376154138 100.00 % 188077069 100.00 % 188077069 100.00 %
General Reads 372235380 98.96 % 186889876 99.37 % 185345504 98.55 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 31 0.00 % 17 0.00 % 14 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 3918727 1.04 % 1187176 0.63 % 2731551 1.45 %
Bisulfite_reads C2T 194888539 51.81 % 97814923 52.01 % 97073616 51.61 %
Bisulfite_reads G2A 177346872 47.15 % 89074970 47.36 % 88271902 46.93 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 140175734
Average Unique 74.53 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14154852675 37.26 % 6148124715 32.37 % 8006727960 42.15 %
Base Counts Overall C 4702516767 12.38 % 218231511 1.15 % 4484285256 23.61 %
Base Counts Overall G 4709260944 12.40 % 4509361500 23.74 % 199899444 1.05 %
Base Counts Overall T 14038929798 36.95 % 7927217992 41.73 % 6111711806 32.17 %
Base Counts Overall N 386007754 1.02 % 192848251 1.02 % 193159503 1.02 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 174806349



Mapping Quality

Mapping Quality Histogram
51_Hf03.Bisulfite-Seq.DNA_methylation.EGAX00001423267.51.mapq.png



Read Length

Read Length Reads
100 188077069
100 188077069



Insert Size Plot

Insert Size Histogram
51_Hf03.Bisulfite-Seq.DNA_methylation.EGAX00001423267.51.isize.png