{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 79965190, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78362825, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.0, 
            "paired": 79965190, 
            "paired_qc_failed": 0, 
            "read1": 39982595, 
            "read1_qc_failed": 0, 
            "read2": 39982595, 
            "read2_qc_failed": 0, 
            "paired_properly": 76802118, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.04, 
            "with_itself": 77940414, 
            "with_itself_qc_failed": 0, 
            "singletons": 422411, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 474584, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 317909612, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 312072580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.16, 
            "paired": 317909612, 
            "paired_qc_failed": 0, 
            "read1": 158954806, 
            "read1_qc_failed": 0, 
            "read2": 158954806, 
            "read2_qc_failed": 0, 
            "paired_properly": 294728580, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.71, 
            "with_itself": 309884253, 
            "with_itself_qc_failed": 0, 
            "singletons": 2188327, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.69, 
            "diff_chroms": 9012143, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 31518317, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 14832228, 
            "paired_opt_dupes": 11210, 
            "dupes_pct": 0.470591
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 121497414, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 13623598, 
            "paired_opt_dupes": 34172, 
            "dupes_pct": 0.112131
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31513925, 
            "distinct_read_pairs": 16683676, 
            "one_read_pair": 8313904, 
            "two_read_pair": 4508035, 
            "NRF": 0.529406, 
            "PBC1": 0.498326, 
            "PBC2": 1.844241
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 121417759, 
            "distinct_read_pairs": 107806572, 
            "one_read_pair": 95829671, 
            "two_read_pair": 10543184, 
            "NRF": 0.887898, 
            "PBC1": 0.888904, 
            "PBC2": 9.089253
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33372178, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33372178, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 33372178, 
            "paired_qc_failed": 0, 
            "read1": 16686089, 
            "read1_qc_failed": 0, 
            "read2": 16686089, 
            "read2_qc_failed": 0, 
            "paired_properly": 33372178, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 33372178, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 215747632, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 215747632, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 215747632, 
            "paired_qc_failed": 0, 
            "read1": 107873816, 
            "read1_qc_failed": 0, 
            "read2": 107873816, 
            "read2_qc_failed": 0, 
            "paired_properly": 215747632, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 215747632, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 55249, 
        "Np": 0, 
        "N_opt": 55249, 
        "N_consv": 55249, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.123843907395423, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1325271, 
            "argmin_corr": 1500, 
            "min_corr": 0.1199015, 
            "NSC": 1.03288, 
            "RSC": 0.3122535
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.131715538487
        }, 
        "rep1-pr1": {
            "FRiP": 0.175601327237
        }, 
        "rep1-pr2": {
            "FRiP": 0.175521569707
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0385428823634
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.279325035052, 
            "auc": 0.491379256393, 
            "ch_div": 0.146764543014, 
            "elbow_pt": 1.17752019962e-114, 
            "jsd": 0.555898069461, 
            "syn_auc": 0.493686447139, 
            "syn_elbow_pt": 0.143955015463, 
            "syn_jsd": 0.245233145867
        }
    ]
}