{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 149010498, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136406092, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.54, 
            "paired": 149010498, 
            "paired_qc_failed": 0, 
            "read1": 74505249, 
            "read1_qc_failed": 0, 
            "read2": 74505249, 
            "read2_qc_failed": 0, 
            "paired_properly": 134362363, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.17, 
            "with_itself": 135158956, 
            "with_itself_qc_failed": 0, 
            "singletons": 1247136, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.84, 
            "diff_chroms": 479754, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 239432188, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 231429253, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.66, 
            "paired": 239432188, 
            "paired_qc_failed": 0, 
            "read1": 119716094, 
            "read1_qc_failed": 0, 
            "read2": 119716094, 
            "read2_qc_failed": 0, 
            "paired_properly": 226374121, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.55, 
            "with_itself": 229579189, 
            "with_itself_qc_failed": 0, 
            "singletons": 1850064, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.77, 
            "diff_chroms": 2056124, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58104358, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 11804874, 
            "paired_opt_dupes": 27006, 
            "dupes_pct": 0.203167
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 93939937, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 11899048, 
            "paired_opt_dupes": 28578, 
            "dupes_pct": 0.126667
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58103516, 
            "distinct_read_pairs": 46298804, 
            "one_read_pair": 36555802, 
            "two_read_pair": 8002381, 
            "NRF": 0.796833, 
            "PBC1": 0.789563, 
            "PBC2": 4.568116
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 93919009, 
            "distinct_read_pairs": 82022723, 
            "one_read_pair": 71424617, 
            "two_read_pair": 9428354, 
            "NRF": 0.873335, 
            "PBC1": 0.870791, 
            "PBC2": 7.575513
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 92598968, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92598968, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 92598968, 
            "paired_qc_failed": 0, 
            "read1": 46299484, 
            "read1_qc_failed": 0, 
            "read2": 46299484, 
            "read2_qc_failed": 0, 
            "paired_properly": 92598968, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 92598968, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 164081778, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 164081778, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 164081778, 
            "paired_qc_failed": 0, 
            "read1": 82040889, 
            "read1_qc_failed": 0, 
            "read2": 82040889, 
            "read2_qc_failed": 0, 
            "paired_properly": 164081778, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 164081778, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 101612, 
        "Np": 0, 
        "N_opt": 101612, 
        "N_consv": 101612, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.194375118739073, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1957045, 
            "argmin_corr": 1500, 
            "min_corr": 0.1808219, 
            "NSC": 1.074954, 
            "RSC": 0.910675
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.533621354452
        }, 
        "rep1-pr1": {
            "FRiP": 0.515588048452
        }, 
        "rep1-pr2": {
            "FRiP": 0.515732415032
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.511204241907
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.171731141903, 
            "auc": 0.494822527864, 
            "ch_div": 0.118927239832, 
            "elbow_pt": 0.0, 
            "jsd": 0.824178086984, 
            "syn_auc": 0.497157059239, 
            "syn_elbow_pt": 0.391131911282, 
            "syn_jsd": 0.473591769522
        }
    ]
}